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Paper · arXiv

SNO-PI: Label-Scarce SNOMED CT Entity Linking with Pre-trained Encoders and Curated Terminology Knowledge

We present SNO-PI, the top-performing submission on SNOMED International's SNOMED CT Entity Linking Benchmark as of 18 October 2026. SNO-PI achieves a macro character IoU of 0.5387, outperforming the organisers' reference system (0.4582; based on the 2024 challenge winner's approach) by 18% relative. Linking clinical mentions to SNOMED CT is a zero- and few-shot problem over a very large label space: the 272 annotated MIMIC-IV discharge summaries cover only 6,595 of the roughly 219,000 eligible concepts, and a third of those occur only once. This motivates a design built on transfer from pre-trained models and human-curated knowledge. SNO-PI combines high-recall span proposal, SapBERT can...

AuthorsPiyawoot Songsiritat
Primary categorycs.CL
Published19 October 2026
Last updated at source19 October 2026
cs.CL
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