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Paper · arXiv

BioBigBird: A Sparse Attention Model for Long-Range Dependency Processing in Biomedical Text

While domain-specific Large Language Models (LLMs) have encoded vast biomedical knowledge, their limited context windows often hinder a deep understanding of nuanced relationships within and across texts. To address this limitation, we introduce BioBigBird, a bidirectional language model pre-trained on extensive biomedical literature and clinical data, specifically designed to handle long-range dependencies. BioBigBird leverages a sparse attention mechanism to process sequences up to 4096 tokens, and its training incorporates a multi-stage process to mitigate noise from the large-scale pre-training corpus. We further enhance its performance by employing a multi-task learning (MTL) framewo...

AuthorsRoshan Balaji, Pavan Kumar S, Vasudev Gupta et al.
Primary categorycs.CL
Published8 October 2026
Last updated at source8 October 2026
cs.CLcs.LG
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