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Paper · arXiv

Learning from Hetero Density for Cryo-EM Protein Reconstruction

Reconstructing protein structures from cryo-electron microscopy (cryo-EM) maps is essential for understanding macromolecular assemblies. Although learning-based methods have improved protein reconstruction, information from hetero components remains underused. Our analysis finds both false predictions and reference protein sites near hetero components; filtering nearby candidates can improve or impair chain construction. We introduce CryoCue, a framework that uses hetero information to guide protein reconstruction. An anchor-supervised detector learns hetero representations across five component classes. Multiscale hetero features guide backbone localization, while predicted hetero candid...

AuthorsXu Han, Chaozhuo Li, Xiaowei Yuan et al.
Primary categorycs.LG
Published8 October 2026
Last updated at source8 October 2026
cs.LG
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