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Paper · arXiv

DrugTargetWorld: A Synthetic Biobank for Training and Benchmarking AI Scientists

Drug target discovery requires distinguishing molecules that causally drive disease from those that are merely associated with it. Training and evaluating AI agents to perform this workflow end-to-end is difficult because real world biobanks lack known causal ground truth and participant-level data is access controlled. We introduce DrugTargetWorld, a framework that procedurally generates simulated biobanks, or "worlds," with known but concealed causal structure. Each world contains genotypes, proteins, health records, outcomes, and synthetic magnetic resonance imaging (MRI) for 54,000 participants. Agents must construct a disease phenotype, identify causal driver proteins, infer the bene...

AuthorsSamuel Margolis, Paul Schmiedmayer, Alan Huang et al.
Primary categorycs.AI
Published7 October 2026
Last updated at source7 October 2026
cs.AI
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