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Paper · arXiv

A Guideline-Augmented Multi-Agent Framework for Schema-as-Code Biomedical Named Entity Recognition

Large language models (LLMs) have shown promising potential for biomedical named entity recognition (BioNER) through instruction following and in-context learning. However, existing LLM-based BioNER methods still face two key limitations. First, retrieved demonstrations and external biomedical knowledge provide limited support for dataset-specific annotation semantics, leaving entity boundaries, type scopes, and annotation conventions ambiguous. Second, free-form generation lacks sufficient structural control, often leading to invalid formats, hallucinated mentions, duplicated entities, and boundary errors. To address these limitations, we propose GAMA, a guideline-augmented multi-agent f...

AuthorsSongtao Li, Yijia Zhang, Shidi Zhang et al.
Primary categorycs.CL
Published2 October 2026
Last updated at source6 October 2026
cs.CL
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