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Paper · arXiv

GraphVQ: Structure-Aware Autoregressive Decoding over Context-Quantized Graph Tokens

Graph foundation models need a discrete token representation, but casting a graph as a generatable token sequence faces a structural obstacle: edges spanning beyond the serialization window cannot be emitted in one pass--so one-pass autoregressive generators systematically under-produce cycles--and a single global condition cannot tell candidate edges apart. GraphVQ removes both obstacles: node contexts--features plus a local edge mask under multi-order breadth-first serialization--are quantized into a shared codebook by a VQ-VAE with BCE-calibrated Bernoulli edge decoding, and a second-stage structure-aware decoder emits the global adjacency conditioned on token-derived pair features, wh...

AuthorsYuxiang Yao, Zijun Zhao
Primary categorycs.LG
Published29 September 2026
Last updated at source29 September 2026
cs.LG
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