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Paper · arXiv

ProtLingo: Efficient Protein Language Modeling via Conditional Memory and Expert Routing

Proteins perform diverse cellular functions, and even single amino-acid substitutions can alter stability, activity, or molecular interactions. Protein language models (PLMs) provide a scalable approach for modeling such sequence--function relationships from unlabeled sequences, but increasing the size of dense Transformer backbones often brings substantial computational cost without consistently improving mutation-sensitive prediction. We introduce ProtLingo, an efficient PLM framework that augments a pretrained single-sequence backbone with conditional local memory and sparse expert routing. ProtLingo maps contextual residue representations into route-specific discrete codes, composes c...

AuthorsMingrui Li, Sixian Shen, Minzhang Li et al.
Primary categorycs.AI
Published4 September 2026
Last updated at source4 September 2026
cs.AI
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