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Paper · arXiv

Seeing Beyond the Lesion: Disease Recognition from Reactive CNS Tissue

Sampling error yields exclusively reactive, non-lesional brain parenchyma in a significant proportion of intracranial biopsies, leaving the underlying disease undiagnosed. We benchmark four pathology foundation models (UNI2-h, Virchow2, Prov-GigaPath, H-optimus-0) as frozen patch encoders within a shared attention-based multiple-instance learning framework using 245 whole-slide images from 186 patients with confirmed downstream diagnoses. We first show that coarse disease-category prediction can be reproduced largely from slide size alone. After restricting classification to three finer diagnostic distinctions within common tissue categories, this confound no longer explains performance, ...

AuthorsJan Schnorrenberg, Jan Ernsting, Enrico Küllenberg et al.
Primary categoryeess.IV
Published2 September 2026
Last updated at source2 September 2026
eess.IVcs.CVq-bio.TO
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