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Paper · arXiv

DynaPPI: A Large-scale Dynamic Protein Dataset for AI-driven Advances in Protein Interactomics

Diffusion models have been widely explored in protein backbone generation due to their powerful generation capabilities.However, in today's AI-driven biological research, predicting the structure of unknown multi-chain protein aggregates (called "complexes" in biology) remains an unsolved challenge.This is because existing static or dynamic protein datasets focus solely on static snapshots or single-entity trajectories, neglecting the dynamic process of multiple monomers forming complexes.To alleviate this dilemma, we present DynaPPI, a dynamic protein dataset comprising molecular dynamics (MD) trajectories of protein complex formation from dissociated chains to the bound state, as a pivo...

AuthorsJiabao Wei, Zilong Geng, Yuze Wang et al.
Primary categorycs.CV
Published11 August 2026
Last updated at source11 August 2026
cs.CV
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