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Paper · arXiv

APO: Unsupervised Atomic Policy Optimization for 3D Structure Prediction of Atomic Systems

Predicting the 3D structures of atomic systems is fundamental to advancing material science and drug discovery. While flow-matching models (, FlowDPO) have recently shown promise in this domain, their performance relies heavily on alignment with ground-truth coordinates via supervised preference learning. However, obtaining experimental labels for novel crystal phases or de novo proteins is prohibitively expensive, creating a bottleneck for structural modeling in data-scarce regimes. In this work, we propose (Atomic Policy Optimization), a fully unsupervised alignment framework that eliminates the need for ground-truth reference structures. APO adapts group-relative policy optimization to...

AuthorsShentong Mo, Yatao Bian
Primary categorycs.LG
Published30 July 2026
Last updated at source30 July 2026
cs.LGcs.AIcs.MA
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