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Paper · arXiv

TheBioCollection: Unified Pre-Training Scale LLM Corpus for Biology

The push toward large language models for biology (BioLM) has created a need for training corpora that can endow models with a genuine understanding of biology. However, existing biological resources, such as molecular databases, protein repositories, genomic annotations, single-cell atlases, and pathway databases, are scattered across heterogeneous formats and remain unorganized into a cohesive corpus for language model training. We present TheBioCollection, a 52.6B-token pre-training-scale corpus that converts these disparate resources into a unified, training-ready form spanning small molecules, proteins, genomic sequences, cells, and pathways. Beyond consolidating existing data, TheBi...

AuthorsHyunjin Seo, Hyeon Hwang, Gyubok Lee et al.
Primary categoryq-bio.QM
Published9 July 2026
Last updated at source15 July 2026
q-bio.QMcs.AIcs.LG
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