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Paper · arXiv

PHOEBI: An Open-World Benchmark for Multi-Label Bacterial Identification in Phase-Contrast Microscopy

Optical microscopy (OM) enables rapid, label-free imaging of live bacteria and is the standard instrument for species identification across clinical, environmental, and industrial microbiology. Real samples, however, are routinely polymicrobial and may contain organisms never seen during training, and no computer-vision benchmark evaluates multi-label species identification from phase-contrast microscopy (PCM) of such mixtures. We introduce Phase-contrast Optical bEnchmark for Bacterial Identification ($\textbf{PHOEBI}$), a wet-lab-prepared dataset of $120{,}000$ PCM images covering $40$ combinations of six rod-shaped species, together with a leave-combinations-out (LCO) protocol that hol...

AuthorsAaditya Baranwal, Md Jahid Hasan, Shruti Vyas
Primary categorycs.CV
Published22 June 2026
Last updated at source3 October 2026
cs.CV
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