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Paper · arXiv

FoundCause: Causal Discovery with Latent Confounders from Observational Data

Causal discovery from observational data remains challenging due to the need to recover directed structure and latent confounding without interventions. We propose FoundCause, an amortized causal discovery model trained entirely on synthetic data that maps datasets directly to causal graphs in a single forward pass. By learning from large collections of simulated structural causal models, FoundCause captures transferable statistical patterns that generalize beyond individual datasets. The architecture incorporates several key inductive biases for causal discovery. It uses a permutation-invariant transformer encoder with alternating attention over samples and variables to jointly model cro...

AuthorsPatrick Blöbaum, Krishnakumar Balasubramanian, Shiva Prasad Kasiviswanathan
Primary categorycs.LG
Published16 June 2026
Last updated at source16 June 2026
cs.LGcs.AIstat.MEstat.ML
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