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Paper · arXiv

POPSICLE: Benchmark Datasets for Segmentation and Localization in CryoET

Cryo-electron tomography (cryoET) has emerged as a powerful tool in structural and cellular biology by enabling direct visualization of macromolecular structures within intact cells, thereby linking molecular architecture to cellular organization in a native context. Realizing the full potential of cryoET, however, increasingly depends on advances in computational analysis, particularly machine learning (ML), to interpret its complex and information-rich data. Despite rapid progress, ML development for cryoET remains bottlenecked by the lack of standardized, well-annotated benchmarks. Existing evaluations are typically small, task-specific, and are assembled in isolation, limiting robust ...

AuthorsJonathan Schwartz, Utz Heinrich Ermel, C. Braxton Owens et al.
Primary categoryeess.IV
Published8 June 2026
Last updated at source8 June 2026
eess.IVcs.CVcs.DLcs.LGphysics.bio-ph
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