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Paper · arXiv

Closing the Prior-Posterior Loop: Self-Reflective Molecular Design with Analysis-Driven LLM Iteration

Can a general-purpose large language model design molecules with the precision of a seasoned chemist? Current LLM-based frameworks answer this question with scalar feedback loops - generate, score, reject - that amount to informed trial-and-error. Here we show that replacing a single number with the full physicochemical rationale from first-principles calculations transforms the LLM from a stochastic sampler into a causal reasoner. Our system couples retrieval-augmented generation with a self-reflection module that feeds orbital energies, atomic charges, and electron densities - rather than compressed scores - back into the design loop. On HOMO-LUMO gap targets from 2.0 to 5.0 eV, this st...

AuthorsJunyi Gong, Zijie Qiu, Ben Zhong Tang
Primary categoryphysics.chem-ph
Published8 June 2026
Last updated at source18 June 2026
physics.chem-phcs.AI
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