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Paper · arXiv

Margin-calibrated Classifier Guidance for Property-driven Synthesis Planning

Synthesis planning seeks an efficient sequence of chemical reactions that produce a target molecule. Typically, a pretrained single-step (autoregressive) retrosynthesis model is repeatedly invoked to generate such a sequence. Classifier guidance can, in principle, help steer the output of single-step model toward reactions that satisfy specific constraints or accommodate chemist's preferences during inference without having to retrain the autoregressive generator. We expose the insufficiency of auxiliary classifiers trained with cross-entropy loss to override the unconditional token-level distributions learned from typical sparse single-disconnection reaction datasets. We overcome this is...

AuthorsNajwa Laabid, Vikas Garg
Primary categorycs.LG
Published13 May 2026
Last updated at source13 May 2026
cs.LGcs.AI
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