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Paper · arXiv

Confidence is the key: how conformal prediction enhances the generative design of permeable peptides

Generative models coupled with reinforcement learning (RL), such as REINVENT and PepINVENT, have emerged as a powerful framework for de novo molecular design. During the ideation process these generative frameworks utilize various predictive models as part of the optimization objectives. However, the utility of the predictive models can be limited by their domain of applicability. When RL is used to explore the chemical space with predictive models, it can suggest molecules that lie outside the predictor's domain of applicability. As a result, the predictions may become less reliable, potentially steering designs into high reward but also high uncertainty chemical spaces. This is particul...

AuthorsLaura van Weesep, Sunay Chankeshwara, Leonardo De Maria et al.
Primary categorycs.AI
Published7 May 2026
Last updated at source7 May 2026
cs.AI
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