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Paper · arXiv

MedStruct-S: A Benchmark for Key Discovery, Key-Conditioned QA and Semi-Structured Extraction from OCR Clinical Reports

Semi-structured information extraction (IE) from OCR-derived clinical reports is crucial for efficiently reconstructing patients' longitudinal medical histories. In practice, this scenario commonly involves three tasks: (i) field-header (key) discovery, (ii) key-conditioned question answering (QA), and (iii) end-to-end key-value pair extraction. However, existing evaluations often under-model two factors: heterogeneous and incompletely known key representations, and OCR-induced noise. This makes it difficult to assess model robustness in real-world settings. We present MedStruct-S, a benchmark specifically designed to evaluate these tasks under unknown keys and OCR noise. MedStruct-S cont...

AuthorsYingyun Li, Yu Wang, Haiyang Qian
Primary categorycs.CL
Published4 May 2026
Last updated at source19 August 2026
cs.CLcs.AIcs.LG
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