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Paper · arXiv

CRC-Screen: Certified DNA-Synthesis Hazard Screening Under Taxonomic Shift

DNA-synthesis providers screen incoming orders by searching the requested sequence against curated hazard lists. We show that this baseline collapses to a 100% false-flag rate when the hazardous sequence comes from a taxonomic family absent from the reference set: under Conformal Risk Control's certified miss-rate constraint, a low-discrimination signal forces the threshold below the entire test-benign mass. We compose three signals derived from a synthesis order's public annotation: $k$-mer Jaccard similarity to known toxins, the trimmed-mean score of a five-LLM judge panel, and cosine similarity to clustered embedding centroids. Fused under a monotone logistic aggregator and calibrated ...

AuthorsNajmul Hasan
Primary categoryq-bio.GN
Published30 April 2026
Last updated at source14 June 2026
q-bio.GNcs.AI
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