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Paper · arXiv

Agentic AI-assisted coding offers a unique opportunity to instill epistemic grounding during software development

The capabilities of AI-assisted coding are progressing at breakneck speed. Chat-based vibe coding has evolved into fully fledged AI-assisted, agentic software development using agent scaffolds where the human developer creates a plan that agentic AIs implement. One current trend is utilizing documents beyond this plan document, such as project and method-scoped documents. Here we propose GROUNDING$.$md, a community-governed, field-scoped epistemic grounding document, using mass spectrometry-based proteomics as an example. We have drafted a file specific to proteomics: proteomics_GROUNDING$.$md (available at https://github.com/OmicsGrounding/proteomics-grounding) to demonstrate what a GROU...

AuthorsMagnus Palmblad, Jared M. Ragland, Benjamin A. Neely
Primary categorycs.SE
Published23 April 2026
Last updated at source21 July 2026
cs.SEcs.AIq-bio.BM
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