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Paper · arXiv

A phenotype-driven and evidence-governed framework for knowledge graph enrichment and hypotheses discovery in population data

Current knowledge graph (KG) construction methods are confirmatory, focusing on recovering known relationships rather than identifying novel or context-dependent nodes. This paper proposes a phenotype-driven and evidence-governed framework that shifts the paradigm toward structured hypothesis discovery and controlled KG expansion. The approach integrates graph neural networks (GNNs) for phenotype discovery, causal inference, probabilistic reasoning and large language models (LLMs) for hypothesis generation and claim extraction within a unified pipeline. The framework prioritizes relationships that are both structurally supported by data and underexplored in the literature. KG expansion is...

AuthorsAdela Bâra, Simona-Vasilica Oprea
Primary categorycs.AI
Published18 April 2026
Last updated at source18 April 2026
cs.AI
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