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Paper · arXiv

MarkushGrapher-2: End-to-end Multimodal Recognition of Chemical Structures

Automatically extracting chemical structures from documents is essential for the large-scale analysis of the literature in chemistry. Automatic pipelines have been developed to recognize molecules represented either in figures or in text independently. However, methods for recognizing chemical structures from multimodal descriptions (Markush structures) lag behind in precision and cannot be used for automatic large-scale processing. In this work, we present MarkushGrapher-2, an end-to-end approach for the multimodal recognition of chemical structures in documents. First, our method employs a dedicated OCR model to extract text from chemical images. Second, the text, image, and layout info...

AuthorsTim Strohmeyer, Lucas Morin, Gerhard Ingmar Meijer et al.
Primary categorycs.CV
Published30 March 2026
Last updated at source30 March 2026
cs.CV
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