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Paper · arXiv

Enhancing Molecular Property Predictions by Learning from Bond Modelling and Interactions

Molecule representation learning is crucial for understanding and predicting molecular properties. However, conventional atom-centric models, which treat chemical bonds merely as pairwise interactions, often overlook complex bond-level phenomena like resonance and stereoselectivity. This oversight limits their predictive accuracy for nuanced chemical behaviors. To address this limitation, we introduce \textbf{DeMol}, a dual-graph framework whose architecture is motivated by a rigorous information-theoretic analysis demonstrating the information gain from a bond-centric perspective. DeMol explicitly models molecules through parallel atom-centric and bond-centric channels. These are synergi...

AuthorsYunqing Liu, Yi Zhou, Wenqi Fan
Primary categorycs.LG
Published28 February 2026
Last updated at source28 February 2026
cs.LGcs.AI
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