zihaojing/Cuttlefish-Encoder-Data

Cuttlefish-Encoder-Data Encoder pretraining dataset for Cuttlefish-Encoder. Contains all-atom structural graphs for molecules, proteins, DNA, and RNA in a unified parquet format. Dataset structure molecules/ # molecule encoder training data nacid/ # DNA and RNA encoder training data protein/ # protein encoder training data (PDB structures) test/ # held-out test samples Schema Field Description modality "molecule", "protein", "dna"… See the full description on the dataset page: https://huggingface.co/datasets/zihaojing/Cuttlefish-Encoder-Data.

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