Dataset · Hugging Face

songlab/TraitGym

Name: TraitGym
Creator: songlab
License: mit
Keywords: license:mit, size_categories:10M<n<100M, format:parquet, modality:tabular, modality:text, library:datasets, library:pandas, library:mlcroissant, library:polars, region:us, dna, variant-effect-prediction, biology, genomics

🧬 TraitGym Benchmarking DNA Sequence Models for Causal Regulatory Variant Prediction in Human Genetics 🏆 Leaderboard: https://huggingface.co/spaces/songlab/TraitGym-leaderboard ⚡️ Quick start Load a datasetfrom datasets import load_dataset dataset = load_dataset("songlab/TraitGym", "mendelian_traits", split="test") Example notebook to run variant effect prediction with a gLM, runs in 5 min on Google Colab: TraitGym.ipynb 🤗 Resources… See the full description on the dataset page: https://huggingface.co/datasets/songlab/TraitGym.

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Author / organization	songlab
License (as declared)	mit
Downloads	7.9K (as reported by Hugging Face)
Likes	13
Created	26 January 2025
Last updated at source	25 March 2025

dnavariant-effect-predictionbiologygenomics

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