Dataset · Hugging Face

nicolas-lynn/vcc-perturb

Name: vcc-perturb
Creator: nicolas-lynn
License: cc-by-4.0
Keywords: task_categories:tabular-regression, license:cc-by-4.0, size_categories:n<1K, format:parquet, modality:tabular, modality:text, library:datasets, library:dask, library:polars, library:mlcroissant, region:us, perturb-seq, single-cell, crispri, crispra

Virtual Cell Challenge 2025 H1 hESC training-set perturbation atlas CRISPRi (gene knockdown) in H1 human embryonic stem cells. Single-cell expression in log-normalized counts. Generated 2026-06-08 as one of three companion atlases (Norman, Replogle, VCC). File schema (each config / single-config repo) File Shape Description pseudobulks.h5ad (50, n_genes) 50 control pseudobulks (15 cells each, log-normalized means). Cell-type-specific baseline.… See the full description on the dataset page: https://huggingface.co/datasets/nicolas-lynn/vcc-perturb.

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Author / organization	nicolas-lynn
License (as declared)	cc-by-4.0
Downloads	274 (as reported by Hugging Face)
Likes	0
Created	8 June 2026
Last updated at source	11 June 2026

perturb-seqsingle-cellcrispricrispraperturbationgene-expression

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