isalgo/airr_tcga

TCGA — tumour AIRR (TCR/BCR) repertoires Adaptive immune receptor (TCR + BCR) repertoires extracted from TCGA tumour bulk RNA-seq, for 9,591 samples spanning 33 cancer types, with matched clinical / demographic metadata and — critically — the total raw sequencing depth of each sample. Built as a benchmark for sample-level (repertoire) analysis in solid tumours, where the recovered receptor content conflates sequencing depth with immune infiltration (TIL fraction) and must be… See the full description on the dataset page: https://huggingface.co/datasets/isalgo/airr_tcga.

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