houlab/motif-db

ARSMA-web motif clips (motif-db) The motif corpus of ARSMA-web: the coordinates of every hairpin loop, bulge and internal loop found in the RNA-containing entries of the Protein Data Bank, clipped out with their closing base pairs. It follows the RNA CoSSMos motif definition (CoSSMos 2.0: two closing base pairs on each side of the loop). This is the table to count motif occurrences from. One row of a <class>.parquet file is one motif occurrence. 285,165 occurrences in 44… See the full description on the dataset page: https://huggingface.co/datasets/houlab/motif-db.

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