Dataset · Hugging Face

gxx27/BioTool

Name: BioTool
Creator: gxx27
License: apache-2.0
Keywords: task_categories:question-answering, task_categories:text-generation, language:en, license:apache-2.0, size_categories:1K<n<10K, format:json, modality:text, library:datasets, library:pandas, library:polars, library:mlcroissant, arxiv:2605.05758, region:us, biomedicine, function-calling

BioTool BioTool is a large-scale, function-calling benchmark and training corpus for the biomedical domain. It pairs natural-language biomedical questions with the correct tool call (function name + JSON arguments) that answers them, drawn from 127 tools spanning the three flagship public APIs: NCBI E-utilities (einfo, esearch, esummary, efetch, elink, ecitmatch) plus BLAST UniProt REST (uniprotkb, uniref, uniparc, proteomes, taxonomy, keywords, human_diseases, …) Ensembl REST… See the full description on the dataset page: https://huggingface.co/datasets/gxx27/BioTool.

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Author / organization	gxx27
License (as declared)	apache-2.0
Downloads	130 (as reported by Hugging Face)
Likes	1
Created	8 May 2026
Last updated at source	8 May 2026

biomedicinefunction-callingtool-usebiotoolncbiuniprotensembl

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