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Dataset · Hugging Face

cruprecht/strainer3-scrub-db

Scrub database genomes/: reference genomes (sharded tar archives of .fna.gz files) metagenomes/: k-mer databases (*.kmdb), sharded archives rocksdb/: sourmash RocksDB index (split archive) Restore with python scrubdb_hf.py pull --repo <user>/<repo> --download-dir <dl> --dest <dir>. See MANIFEST.json for the machine-readable layout.

Author / organizationcruprecht
License (as declared)other
Downloads0 (as reported by Hugging Face)
Likes0
Created22 October 2026
Last updated at source22 October 2026
metagenomicsbacterial-genomesstrain-detection
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Recent changes

  • 22 Oct 2026 License: none → other
  • 22 Oct 2026 Description: none → Scrub database genomes/: reference genomes (sharded tar archives of .fna.gz files) metagenomes/: k-mer databases (*.kmdb), sharded archives rocksdb/: sourmash RocksDB index (split archive) Restore with python scrubdb_hf.py pull --repo <user
  • 22 Oct 2026 Topics added metagenomics, bacterial-genomes, strain-detection

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Silytics shows public metadata from Hugging Face and links to the original. Information may be incomplete or out of date. Last refreshed 22 October 2026. Licenses and terms of the original apply to the work itself. Not financial, legal or professional advice.