Dataset · Hugging Face

arcinstitute/PIE_x_atlas_orion

Name: PIE_x_atlas_orion
Creator: arcinstitute
Keywords: size_categories:100M<n<1B, format:parquet, format:optimized-parquet, modality:tabular, modality:text, library:datasets, library:pandas, library:polars, library:mlcroissant, region:us, biology, single-cell, perturb-seq, crispri, differential-expression

PIE: X-Atlas/Orion Differential-expression (DE) tables and the preprocessed dir for PIE, built from X-Atlas/Orion (Huang et al., 2025), genome-wide CRISPRi Perturb-seq screens in HCT116 and HEK293T. This dataset is a training dataset of the PIE replogle_xdataset experiment. Datasets and knowledge sources: PIE collection Contents de/<cell_line>.parquet per-cell-line DE, one row per (perturbation, gene) preprocessed/ PIE preprocessed dir, with the… See the full description on the dataset page: https://huggingface.co/datasets/arcinstitute/PIE_x_atlas_orion.

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Author / organization	arcinstitute
Downloads	4K (as reported by Hugging Face)
Likes	1
Created	30 September 2026
Last updated at source	5 October 2026

biologysingle-cellperturb-seqcrispridifferential-expression

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arcinstitute/PIE_replogle_xdatasetModel · used to train

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