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JFLa/perturb-seq-pseudo-pairing-benchmarks

Perturb-seq Pseudo-pairing Benchmarks Dataset Summary This repository provides processed single-cell perturbation transcriptomic datasets and representative pseudo-control pairings used to study how pseudo-control construction affects perturbation modeling. Single-cell perturbation assays are destructive: the same cell cannot be observed before and after perturbation. Cell-level modeling therefore requires an estimated or sampled unperturbed counterpart, referred… See the full description on the dataset page: https://huggingface.co/datasets/JFLa/perturb-seq-pseudo-pairing-benchmarks.

Author / organizationJFLa
License (as declared)mit
Downloads216 (as reported by Hugging Face)
Likes0
Created30 July 2026
Last updated at source3 August 2026
single-celltranscriptomicsperturb-seqcrispricrispradrug-responsepseudo-controloptimal-transportmetacellsanndatah5adcomputational-biology
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